Chickpea

Data	Resequencing of 429 chickpea accessions from 45 countries
Data size	~1.7 Tbp	300 samples
NCBI Accession	PRJNA362278
Source	Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits. Nature Genetics 2019, 51:857–864.  https://doi.org/10.1038/s41588-019-0401-3

Data	Resequencing of 129 varieties released between 1948 and 2012
Data size	~773 Gbp	129 samples
NCBI Accession	PRJNA328187
Source	Recent breeding programs enhanced genetic diversity in both desi and kabuli varieties of chickpea (Cicer arietinum L.). Scientific Reports 2016, 6:38636. https://doi.org/10.1038/srep38636

Pigeonpea

Data	Whole genome resequencing of 292 pigeonpea accessions
Data size	~2.19 Tbp	292 samples
NCBI Accession	PRJNA383013
Source	Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits. Nature Genetics 2017, 49:1082–1088. https://doi.org/10.1038/ng.3872

Groundnut

Data	Resequencing data for wild and cultivated groundnut genotypes
Data size	~974 Gbp	27 samples
NCBI Accession	PRJNA490835
Source	The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics 2019, 51:865–876. https://doi.org/10.1038/s41588-019-0402-2

Data	Resequencing data for wild and cultivated groundnut genotypes
Data size	~2.58 Tbp	96 samples
NCBI Accession	PRJNA490832
Source	The genome sequence of segmental allotetraploid peanut Arachis hypogaea. Nature Genetics 2019, 51:877–884. https://doi.org/10.1038/s41588-019-0405-z

Pearl millet

Data	Whole genome resequencing of PMiGAP lines represents germplasm from 27 countries in two continents
Data size	~1.5 Tbp	383 samples
NCBI Accession	SRP063925
Source	https://doi.org/10.1038/nbt.3943

Groundnut

Data	WGRS data for two parents and two pooled samples for foliar disease resistance in groundnut
Data size	~ 79 Gbp	2 samples
NCBI Accession	PRJNA511348
Source	Whole‐genome resequencing‐based QTL‐seq identified candidate genes and molecular markers for fresh seed dormancy in groundnut. Plant Biotechnology Journal 2020, 18:992-1003. https://doi.org/10.1111/pbi.13266

Pearl millet

Data	RAD-sequencing of 580 B- and R-lines of pearl millet
Data size	~614 Gbp	580 samples
NCBI Accession	SRP063925
Source	Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology 2017, 35:969–976. https://doi.org/10.1038/nbt.3943

Chickpea

Data	Integrated analysis of three approaches, viz., transcriptome, small RNA and degradome sequencing was performed to dissect Ascochyta blight resistance mechanism in chickpea
Data size	~1.35 (B) reads	20 samples
NCBI Accession	PRJNA479940
Source	Integrated transcriptome, small RNA and degradome sequencing approaches provide insights into Ascochyta blight resistance in chickpea. Plant Biotechnology Journal 2019, 17:914-931. https://doi.org/10.1111/pbi.13026

Data	Comprehensive Cicer arietinum Gene Expression Atlas (CaGEA) across different plant developmental stages and organs covering the entire life cycle of chickpea
Data size	~817 (M) reads	27 samples
NCBI Accession	PRJNA413872
Source	The RNA‐Seq‐based high resolution gene expression atlas of chickpea (Cicer arietinum L.) reveals dynamic spatio‐temporal changes associated with growth and development. Plant, Cell & Environment 2018, 41:2209– 2225. https://doi.org/10.1111/pce.13210

Data	Transcriptome analysis of drought stressed tissues of two Iranian chickpea genotypes
Data size	~624 (M) reads	8 samples
NCBI Accession	PRJNA396819
Source	RNA-Seq analysis revealed genes associated with drought stress response in kabuli chickpea (Cicer arietinum L.). PLoS ONE 2018, 13(6): e0199774. https://doi.org/10.1371/journal.pone.0199774

Data	Chickpea transcriptome determined using Roche⁄454 and Illumina sequencing technologies, identified drought-responsive genes and gene-based molecular markers
No. of samples	6 samples
NCBI Accession	PRJNA80015
Source	Large‐scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi‐arid tropics of Asia and Africa. Plant Biotechnology Journal 2011, 9: 922-931. https://doi.org/10.1111/j.1467-7652.2011.00625.x

Data	A comprehensive resource of drought- and salinity- responsive expressed sequence tags
Data size	20,162 ESTs
Genebank Accession	GR390696-GR410171; GR420430-GR421115
Source	A comprehensive resource of drought- and salinity- responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.). BMC Genomics 2009, 10:523. https://doi.org/10.1186/1471-2164-10-523

Pigeonpea

Data	Whole genome transcriptome data of two commercially released pigeonpea hybrids and their parental lines
Data size	~242.93 (M) reads	6 samples
NCBI Accession	PRJNA549058
Source	Genome-wide analysis of epigenetic and transcriptional changes associated with heterosis in pigeonpea. Plant Biotechnology Journal. 2020 Feb 3:1-4 https://doi.org/10.1111/pbi.13333

Data	Comprehensive RNA-Seq data generated from samples representing flowering to mature pod development in pigeonpea using Illumina HiSeq 2500
Data size	~684 (M) reads	9 samples
NCBI Accession	PRJNA344973
Source	Deciphering Transcriptional Programming during Pod and Seed Development Using RNA-Seq in Pigeonpea (Cajanus cajan). PLoS ONE 2016, 11(10): e0164959. https://doi.org/10.1371/journal.pone.0164959

Data	Cajanus cajan gene expression atlas (CcGEA) developed from 30 samples representing developmental stages from germination to senescence using Illumina sequencing platform
Data size	~590 (M) reads	30 samples
NCBI Accession	PRJNA354681
Source	Gene expression atlas of pigeonpea and its application to gain insights into genes associated with pollen fertility implicated in seed formation. Journal of Experimental Botany 2017, 68:2037–2054. https://doi.org/10.1093/jxb/erx010

Data	A comprehensive resource of fusarium wilt and sterility mosaic disease- responsive expressed sequence tags (ESTs) in pigeonpea
Data size	9,888 ESTs	6 samples
Genebank Accession	GR463974-GR473857; GR958228-GR958231
Source	The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanus cajanL.). BMC Plant Biology 2010, 10:45. https://doi.org/10.1186/1471-2229-10-45

Groundnut

Data	An integrated Arachis Gene Expression Atlas (AhGEA) for fastigiata subspecies across important plant tissues/ organs covering the entire life cycle of groundnut
Data size	~535 (M) reads	20 samples
NCBI Accession	PRJNA484860
Source	Arachis hypogea gene expression atlas (AhGEA) for fastigiata subspecies of cultivated groundnut to accelerate functional and translational genomics applications. Plant Biotechnology Journal, Accepted Author Manuscript. https://doi.org/10.1111/pbi.13374

Data	Transcriptome analysis for drought tolerance in cultivated groundnut
Data size	~369 (M) reads	12 samples
NCBI Accession	PRJNA498570
Source	Genome-wide transcriptome and physiological analyses provide new insights into peanut drought response mechanisms. Scientific Reports 2020, 10:4071. https://doi.org/10.1038/s41598-020-60187-z

Data	Transcriptome analysis for in-vitro seed colonization resistance in cultivated groundnut
Data size	~1.34 (B ) reads	16 samples
NCBI Accession	PRJNA355201
Source	Aspergillus flavus infection triggered immune responses and host-pathogen cross-talks in groundnut during in-vitro seed colonization. Scientific Reports 2017, 7:9659. https://doi.org/10.1038/s41598-017-09260-8

Pearl millet

Data	Transcriptome sequence data for two pearl millet accessions
Data size	~155 (M) reads	2 samples
NCBI Accession	PRJNA391885
Source	Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotechnology 2017, 35:969–976. https://doi.org/10.1038/nbt.3943

Others

Data	RNA-seq data for response of several isolates of A. flavus to increasing oxidative stress
Data size	~1.3 (B) reads	17 samples
NCBI Accession	PRJNA348383
Source	Responses of Aspergillus flavus to Oxidative Stress Are Related to Fungal Development Regulator, Antioxidant Enzyme, and Secondary Metabolite Biosynthetic Gene Expression. Frontiers in Microbiology 2016, 7:2048. https://doi.org/10.3389/fmicb.2016.02048

Chickpea

Data	Integrated analysis of three approaches, viz., transcriptome, small RNA and degradome sequencing was performed to dissect Ascochyta blight resistance mechanism in chickpea
Data size	~532.8 (M) reads	20 samples
NCBI Accession	PRJNA479940
Source	Integrated transcriptome, small RNA and degradome sequencing approaches provide insights into Ascochyta blight resistance in chickpea. Plant Biotechnology Journal 2019, 17: 914-931. https://doi.org/10.1111/pbi.13026

Pigeonpea

Data	Genome-wide small RNA sequencing data of two hybrids and their parental lines
Data size	~143 (M) reads	6 samples
NCBI Accession	PRJNA549058
Source	Genome‐wide analysis of epigenetic and transcriptional changes associated with heterosis in pigeonpea. Plant Biotechnology Journal, https://doi.org/10.1111/pbi.13333

Pigeonpea

Data	Whole genome bisulphite sequence of two commercially released pigeonpea hybrids and their parental lines
Data size	~1133 (M) reads	6 samples
NCBI Accession	PRJNA549058
Source	Genome‐wide analysis of epigenetic and transcriptional changes associated with heterosis in pigeonpea. Plant Biotechnology Journal, https://doi.org/10.1111/pbi.13333